Models

The models are located at dcc/modeldcc/models.py.

class modeldcc.models.AppliedAssay(id, appliedassay_id, biosamplereplicate, assay, controlled_by, user, date_added, date_edited)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.Assay(id, assay_id, assay_type, assay_lab, description, target, library_prep, user, date_added, date_edited)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.BatchUploadDetails(id, batchUpload, errors, row_type, series00internal_id, series00series_id, series00title, series00series_type, series00is_public, series00description, series00publication, series00sra_geo_id, biosample00internal_id, biosample00biosample_id, biosample00biosample_type, biosample00biosample_lab, biosample00genetic_background, biosample00stage, biosample00controlled_by, biosample00anatomical_term, biosample00organism, biosample00treatment, biosample00post_fertilization, biosample00source, biosample00sex, biosample00mutation_description, biosample00cell_line_type, biosample00description, biosamplereplicate00internal_id, biosamplereplicate00biosamplereplicate_id, assay00internal_id, assay00assay_id, assay00assay_type, assay00assay_lab, assay00description, assay00target, assay00library_prep, appliedassay00internal_id, appliedassay00appliedassay_id, appliedassay00controlled_by, technicalreplicate00internal_id, technicalreplicate00technicalreplicate_id, sequencing00internal_id, sequencing00sequencing_id, sequencing00platform, sequencing00sequencing_lab, sequencing00instrument, sequencing00chemistry_version, sequencing00paired_end, sequencing00strand_mode, sequencing00sequencing_date, sequencing00max_read_length, data00url, data00local_path, data00secondary_url, data00secondary_local_path)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.BatchUploads(id, csvFile, user, isValid, committed)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.Biosample(id, biosample_id, series, biosample_type, biosample_lab, genetic_background, stage, controlled_by, anatomical_term, organism, treatment, post_fertilization, source, sex, mutation_description, cell_line_type, description, user, date_added, date_edited)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.BiosampleReplicate(id, biosamplereplicate_id, biosample, user, date_added, date_edited)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.Data(id, data_id, sequencing, primary_file, secondary_file, derived_from, file_type, command, mapped_genome, primary_source, secondary_source, sha1, version, user, date_added, date_edited)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.Sequencing(id, sequencing_id, technicalreplicate, sequencing_lab, platform, instrument, chemistry_version, paired_end, strand_mode, max_read_length, sequencing_date, user, date_added, date_edited)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.Series(id, series_id, title, series_type, is_public, description, status, publication, sra_geo_id, user, date_added, date_edited)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.TechnicalReplicate(id, technicalreplicate_id, appliedassay, user, date_added, date_edited)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.Versions(id, name)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.anatomical_terms(id, name)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.assay_types(id, name)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.biosample_types(id, name)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.developmental_stages(id, name)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.file_types(id, name)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.genetic_backgrounds(id, name)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.instruments(id, name)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.labs(id, lab_id, name, lab_pi, lab_institution, lab_country, date_added)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.mapped_genomes(id, name)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.organisms(id, name)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.platforms(id, name)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.sexes(id, name)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.statuses(id, name)

exception DoesNotExist

exception MultipleObjectsReturned

class modeldcc.models.strand_modes(id, name)

exception DoesNotExist

exception MultipleObjectsReturned